Protector of Elona trouble - Missing quests?

I'm a prophecies character that just finished the elona quest chain from start (consulate docks) to finish (abbadon).

My title track is 14/20. I know there are 3 more missions before consulate docks, but where are the other three missions I'm missing?

Do I have to do something in the challenge missions or what?

-The plot branches at three points depending on the decisions you make so once after you've finished the game you'll need to go back and do either Nundu Bay or Jennur's Horde, either Rilohn Refuge or Poghan Passage, and either Dzaganur Bastion or Dasha Vestibule. The latter two will depend on whether you chose Margrid or the Master of Whispers, and the first will depend on whether you chose to help Koss or Melonni.
-If you have done those missions, you must have just missed getting master completion on some of them.

Pls check: http://www.guildwiki.org/Nightfall it's all in there Enjoy

Thnx for the help guys. I actually did look around for the answer to this, but nothing made sense.

The full walkthrough through NF is here.

If you're lazy to read it, do following:
Explore all Elonian outposts, two of them will offer you mission.
Than go to Zerai the Learner in The Kodash Bazaar and accept all his quests and follow them. (Heart of Mind)